About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides18663-
Paelopatides18664-
Paelopatides18665EPM2A-INTERACTING PROTEIN 1
Paelopatides18666TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE
Paelopatides18667ACTIN
Paelopatides18668UNCHARACTERIZED
Paelopatides18669-
Paelopatides18670-
Paelopatides18671SYNAPTOTAGMIN
Paelopatides18672SYNAPTOTAGMIN
Paelopatides18674-
Paelopatides18675-
Paelopatides18676ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides18677-
Paelopatides18678TRANSPOSON
Paelopatides18679TRANSPOSASE, PUTATIVE-RELATED
Paelopatides18680OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides18681ATP-BINDING CASSETTE SUB-FAMILY C
Paelopatides18682-
Paelopatides18683-
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