About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides18642-
Paelopatides18643PROTEIN CBG26694
Paelopatides18644CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
Paelopatides18645TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides18646-
Paelopatides18647AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Paelopatides18648-
Paelopatides18649CYCLINS
Paelopatides18651PROTEIN CBG26694
Paelopatides18652PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides18653RNA POLYMERASE II NUCLEAR LOCALIZATION PROTEIN SLC7A6OS-RELATED
Paelopatides18654PROTEIN CBG26694
Paelopatides18655ENDONUCLEASE-RELATED
Paelopatides18656PROTEIN CBG26694
Paelopatides18657-
Paelopatides18658-
Paelopatides18659REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides18660-
Paelopatides18661-
Paelopatides18662VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE
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