About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides1855480 KDA MCM3-ASSOCIATED PROTEIN
Paelopatides18555REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides18556-
Paelopatides18557-
Paelopatides18558SERINE/THREONINE-PROTEIN KINASE 17
Paelopatides18559BUCENTAUR RELATED
Paelopatides18560PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides18561ADP-RIBOSYLGLYCOHYDROLASE
Paelopatides18563PROTEIN CBG26694
Paelopatides18564-
Paelopatides18565MONOCARBOXYLATE TRANSPORTER
Paelopatides18566REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides18567TRANSMEMBRANE PROTEIN 232
Paelopatides18568REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides18569PROTEIN CBG26694
Paelopatides18570ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides18571ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides18572SPONDIN
Paelopatides18573CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides18574-
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