About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides18978-
Paelopatides18979MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Paelopatides18980DOMAIN OF UNKNOWN FUNCTION 71 DUF71 -CONTAINING PROTEIN
Paelopatides18981GEO11136P1-RELATED
Paelopatides18982PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides1898352 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides18984-
Paelopatides18985REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides18986CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides18987CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides18988SOLUTE CARRIER FAMILY 2
Paelopatides18989-
Paelopatides18990G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE
Paelopatides18991SEC14 RELATED PROTEIN
Paelopatides18992REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides18993TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides18994SEC14 RELATED PROTEIN
Paelopatides18995PEROXISOME ASSEMBLY PROTEIN 12 PEROXIN-12
Paelopatides18996PEROXISOME ASSEMBLY PROTEIN 12 PEROXIN-12
Paelopatides18997-
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