About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides19600REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides19601REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides19603-
Paelopatides19604PROTEIN CBG26694
Paelopatides19605PROTEIN CBG26694
Paelopatides19606PARANEOPLASTIC ANTIGEN
Paelopatides19607PROTEIN CBG26694
Paelopatides19608PROTEIN CBG26694
Paelopatides19609ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides19610-
Paelopatides19611GAG-RELATED PROTEIN
Paelopatides19612ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides1961360S RIBOSOMAL PROTEIN L38
Paelopatides19614PROTEIN KINASE RELATED
Paelopatides19615ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides19616ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides19617ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides19618REVERSE TRANSCRIPTASES
Paelopatides19619-
Paelopatides19620-
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