About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides19580FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides19581-
Paelopatides19582-
Paelopatides19583-
Paelopatides19584-
Paelopatides19585PYRROLINE-5-CARBOXYLATE REDUCTASE
Paelopatides19586PYRROLINE-5-CARBOXYLATE REDUCTASE
Paelopatides19587-
Paelopatides19588STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
Paelopatides19589CYTOCHROME P450 508A4-RELATED
Paelopatides19590ZINC FINGER PROTEIN
Paelopatides19591-
Paelopatides19592REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides19593-
Paelopatides19594FATTY ACID DESATURASE 2
Paelopatides19595-
Paelopatides19596-
Paelopatides19597BONUS, ISOFORM C-RELATED
Paelopatides19598REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides19599BONUS, ISOFORM C-RELATED
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