About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides19539PROTEIN CBG26694
Paelopatides19540PROTEIN CBG26694
Paelopatides19541REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides19542ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides19543ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides19544MULTIVESICULAR BODY SUBUNIT 12B
Paelopatides19545WD-40 REPEAT PROTEIN
Paelopatides19546ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides19547TRANSMEMBRANE PROTEIN 179B
Paelopatides19548CYSTEINE-RICH PDZ-BINDING PROTEIN
Paelopatides19549RIBONUCLEOPROTEIN RB97D
Paelopatides19550REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides19551PKA ANCHORING PROTEIN
Paelopatides19552-
Paelopatides19553-
Paelopatides19554CARBAMOYLTRANSFERASE FAMILY MEMBER
Paelopatides19555CARBAMOYLTRANSFERASE FAMILY MEMBER
Paelopatides19556CARBAMOYLTRANSFERASE FAMILY MEMBER
Paelopatides19557FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides19558-
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