About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides20687POU DOMAIN
Paelopatides20688BUCENTAUR RELATED
Paelopatides20689REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides20690ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides20691-
Paelopatides20692POL PROTEIN
Paelopatides20694REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides20695-
Paelopatides20696RH59310P
Paelopatides20697-
Paelopatides20698-
Paelopatides20699FERRITIN
Paelopatides20700UNCHARACTERIZED
Paelopatides20701UNCHARACTERIZED
Paelopatides20702-
Paelopatides20703NUCLEAR RECEPTOR COACTIVATOR
Paelopatides20704-
Paelopatides20705-
Paelopatides20706PROTEIN CBG26694
Paelopatides20707-
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