About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides20612-
Paelopatides20613-
Paelopatides20614NETRIN RECEPTOR UNC5
Paelopatides20615SI:CH211-108C17.2-RELATED-RELATED
Paelopatides20616-
Paelopatides20617PARANEOPLASTIC ANTIGEN
Paelopatides20618ENZYMATIC POLYPROTEIN-RELATED
Paelopatides20619SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Paelopatides20625ENDONUCLEASE-RELATED
Paelopatides20626-
Paelopatides20627-
Paelopatides20628SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides20629UNCHARACTERIZED
Paelopatides20640ATP-DEPENDENT DNA HELICASE
Paelopatides20641THAP DOMAIN PROTEIN
Paelopatides20642-
Paelopatides20643-
Paelopatides20644DNA HELICASE RECQ FAMILY MEMBER
Paelopatides20645ZINC FINGER PROTEIN
Paelopatides20646-
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