About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides20667GAG-RELATED PROTEIN
Paelopatides20668PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides20669-
Paelopatides20670ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides20671-
Paelopatides20672-
Paelopatides20673REVERSE TRANSCRIPTASES
Paelopatides20674ENDONUCLEASE-RELATED
Paelopatides20675ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED
Paelopatides20676NUCLEOPORIN NUP84-RELATED
Paelopatides20677APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Paelopatides20678-
Paelopatides20679DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides20680-
Paelopatides20681ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides20682INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides20683POL PROTEIN
Paelopatides20684PARANEOPLASTIC ANTIGEN
Paelopatides20685-
Paelopatides20686-
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