About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides21021IP13529P
Paelopatides21022CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
Paelopatides21023CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
Paelopatides21024-
Paelopatides21025-
Paelopatides21027RNA HELICASE
Paelopatides21028GTP-BINDING PROTEIN HFLX
Paelopatides21029-
Paelopatides21030-
Paelopatides2103152 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides21032-
Paelopatides21033MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED
Paelopatides21034RUVB-RELATED REPTIN AND PONTIN
Paelopatides21035RUVB-RELATED REPTIN AND PONTIN
Paelopatides21036-
Paelopatides21037REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides21038-
Paelopatides21039-
Paelopatides21040-
Paelopatides21041G PROTEIN-COUPLED RECEPTOR-RELATED
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