About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides21062PACHYTENE CHECKPOINT PROTEIN 2
Paelopatides21063EPM2A-INTERACTING PROTEIN 1
Paelopatides21064ANAMORSIN
Paelopatides21065-
Paelopatides21066-
Paelopatides21067IP01015P-RELATED
Paelopatides21068KRAB AND ZINC FINGER DOMAIN-CONTAINING
Paelopatides21069ZINC FINGER PROTEIN
Paelopatides21070KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED
Paelopatides21071-
Paelopatides21072CARBOHYDRATE SULFOTRANSFERASE 15
Paelopatides21073REVERSE TRANSCRIPTASES
Paelopatides21074-
Paelopatides21075PROTEIN CBG26694
Paelopatides21076TETRATRICOPEPTIDE REPEAT PROTEIN 22
Paelopatides21077TETRATRICOPEPTIDE REPEAT PROTEIN 22
Paelopatides21078TETRATRICOPEPTIDE REPEAT PROTEIN 22
Paelopatides21079-
Paelopatides21080ZGC:195170
Paelopatides21081REVERSE TRANSCRIPTASES
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