About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides21207PARANEOPLASTIC ANTIGEN
Paelopatides21208PROTEIN CBG26694
Paelopatides21209ENDONUCLEASE-RELATED
Paelopatides21210-
Paelopatides21211ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides21212-
Paelopatides21213PROTEIN CBG26694
Paelopatides21214MULTICOPPER OXIDASE-RELATED
Paelopatides21215-
Paelopatides21216CYSTEINE PROTEASE FAMILY C1-RELATED
Paelopatides21217G DOMAIN-CONTAINING PROTEIN
Paelopatides21218PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides21219PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides21220-
Paelopatides21221G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides21222NEUROLIGIN
Paelopatides21223PROTEIN CBG26694
Paelopatides21224EPM2A-INTERACTING PROTEIN 1
Paelopatides21225ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides21226PERIAXIN-LIKE
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