About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides21268ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides21269PROTEIN CBG26694
Paelopatides21270PROTEIN CBG26694
Paelopatides21271-
Paelopatides21272ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides21273ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides21274PROTEIN CBG26694
Paelopatides21275-
Paelopatides21276FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides21277FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides21278ZGC:195170
Paelopatides21279PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides21280EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
Paelopatides21282-
Paelopatides21283REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides21284REVERSE TRANSCRIPTASES
Paelopatides21285ASPARTYL/LYSYL-TRNA SYNTHETASE
Paelopatides21286L-ASPARAGINASE
Paelopatides21287B-CELL RECEPTOR CD22
Paelopatides21288ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 6-INTERACTING PROTEIN 6
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