About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides21590ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides21591-
Paelopatides21592ZGC:195170
Paelopatides21593ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides21594NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides21595AGAP005574-PA
Paelopatides21596-
Paelopatides21597-
Paelopatides21598POL PROTEIN
Paelopatides21599PROTEIN CBG26694
Paelopatides21600-
Paelopatides21601TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides21602ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides21603HISTIDINE-RICH GLYCOPROTEIN
Paelopatides21604-
Paelopatides21605-
Paelopatides21606JNK-INTERACTING PROTEIN 1-LIKE PROTEIN
Paelopatides21607EPM2A-INTERACTING PROTEIN 1
Paelopatides21608GAG-RELATED PROTEIN
Paelopatides21609INACTIVE TYROSINE-PROTEIN KINASE 7
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