About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides21999ANGIOTENSIN-CONVERTING ENZYME
Paelopatides22000REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides22001ANGIOTENSIN-CONVERTING ENZYME
Paelopatides22002ANGIOTENSIN-CONVERTING ENZYME
Paelopatides22003ANGIOTENSIN-CONVERTING ENZYME
Paelopatides22004MIP08469P
Paelopatides22005FUMARATE HYDRATASE-RELATED
Paelopatides22006LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Paelopatides22007SPLICING FACTOR SF3A-RELATED
Paelopatides22008REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides22009ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides22010-
Paelopatides22011SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Paelopatides22012-
Paelopatides22013-
Paelopatides22014-
Paelopatides22015HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides22016HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides22017HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides22018ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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