About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides21957TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides21958-
Paelopatides21959-
Paelopatides21961TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides21963FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides21964-
Paelopatides21965-
Paelopatides21966-
Paelopatides21967YIPPEE DOMAIN-CONTAINING PROTEIN
Paelopatides21968-
Paelopatides21969PALMITOYLTRANSFERASE
Paelopatides21970-
Paelopatides21971-
Paelopatides21972-
Paelopatides21973-
Paelopatides21974RIBOSOMAL PROTEIN S6 KINASE
Paelopatides21975ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides21976ENZYMATIC POLYPROTEIN-RELATED
Paelopatides21977ENZYMATIC POLYPROTEIN-RELATED
Paelopatides21978DNA HELICASE RECQ FAMILY MEMBER
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