About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides21935T-SNARE COILED-COIL HOMOLOGY DOMAIN-CONTAINING PROTEIN
Paelopatides21936PROTEIN CBG26694
Paelopatides21938EPM2A-INTERACTING PROTEIN 1
Paelopatides21939-
Paelopatides21940-
Paelopatides21941DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides21942-
Paelopatides21943EGF-LIKE-DOMAIN, MULTIPLE 7, 8
Paelopatides21944-
Paelopatides2194660S RIBOSOMAL PROTEIN L27
Paelopatides21947TUBULIN
Paelopatides21948ATP-BINDING TRANSPORT PROTEIN-RELATED
Paelopatides21949REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides21950AMINE OXIDASE
Paelopatides21951-
Paelopatides21952ENDONUCLEASE-RELATED
Paelopatides21953-
Paelopatides21954-
Paelopatides21955PROTEIN O-MANNOSYL-TRANSFERASE TMTC2
Paelopatides21956SKICH DOMAIN-CONTAINING PROTEIN
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