About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides22193SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Paelopatides22194-
Paelopatides22195UNCHARACTERIZED
Paelopatides22196-
Paelopatides22197REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides22198TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides22199TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides22200LEUCINE-RICH REPEAT-CONTAINING PROTEIN 42
Paelopatides22201-
Paelopatides22202-
Paelopatides22203RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides22204PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides22205-
Paelopatides22206-
Paelopatides22207-
Paelopatides22208ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides22209RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides22210PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides22211TRANSPOSON
Paelopatides22212FRUCTOSE-2,6-BISPHOSPHATASE TIGAR
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