About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides22253-
Paelopatides22254PROTECTION OF TELOMERES 1
Paelopatides22255PROTECTION OF TELOMERES 1
Paelopatides22256MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED
Paelopatides22257-
Paelopatides22258REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides22259RIDDLE
Paelopatides22260-
Paelopatides22261GLYCOPROTEIN HORMONE RECEPTOR
Paelopatides22262-
Paelopatides22263G DOMAIN-CONTAINING PROTEIN
Paelopatides22264AP ENDONUCLEASE
Paelopatides22265-
Paelopatides22266TRANSMEMBRANE PROTEIN
Paelopatides22267TIMELESS INTERACTING-RELATED
Paelopatides22268COILED-COIL DOMAIN-CONTAINING PROTEIN 30
Paelopatides22269GAG-RELATED PROTEIN
Paelopatides22270UNCHARACTERIZED
Paelopatides22271PHOSPHATIDYLINOSITOL GLYCAN
Paelopatides22272REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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