About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides23407ARYLSULFATASE
Paelopatides23408-
Paelopatides23409-
Paelopatides23410SI:CH211-196P9.1-RELATED
Paelopatides23413ALPHA- 1,3 -FUCOSYLTRANSFERASE
Paelopatides23414COILED-COIL DOMAIN-CONTAINING PROTEIN 173
Paelopatides23415-
Paelopatides23416-
Paelopatides23417-
Paelopatides23418ENHANCER OF MRNA-DECAPPING PROTEIN 4
Paelopatides23419PROTEIN CBG26694
Paelopatides23420ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides23421ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides23422PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides23423-
Paelopatides23424ENDONUCLEASE
Paelopatides23425PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides23426NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides23427FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides23429HISTONE H3
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