About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides23386-
Paelopatides23387-
Paelopatides23388EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA
Paelopatides23389ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides23390TRANSPOSASE, PUTATIVE-RELATED
Paelopatides23391ENDONUCLEASE
Paelopatides23392SI:CH211-196P9.1-RELATED
Paelopatides23394FORKHEAD BOX PROTEIN
Paelopatides23395UNCHARACTERIZED
Paelopatides23396-
Paelopatides23397CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides23398CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides23399ENDONUCLEASE-RELATED
Paelopatides23400TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides23401-
Paelopatides23402PARANEOPLASTIC ANTIGEN
Paelopatides23403-
Paelopatides23404TRNA (URACIL-5-)-METHYLTRANSFERASE
Paelopatides23405-
Paelopatides23406UNCHARACTERIZED
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