About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides23483GAG-RELATED PROTEIN
Paelopatides23484ZGC:195170
Paelopatides23485-
Paelopatides23486PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides23487RETROTRANSPOSON
Paelopatides23488CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1
Paelopatides23489TRANSCRIPTIONAL REPRESSOR PROTEIN YY
Paelopatides23490PERIAXIN-LIKE
Paelopatides23491INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides23492SCAVENGER RECEPTOR CLASS F
Paelopatides23493ALPHA-AMYLASE FAMILY MEMBER
Paelopatides23494MYOTONIC DYSTROPHY S/T KINASE-RELATED
Paelopatides23495PROTEIN CBG26694
Paelopatides23496PROTEIN CBG26694
Paelopatides23497PROTEIN CBG26694
Paelopatides23498-
Paelopatides23499PROTEIN CBG26694
Paelopatides23500PROTEIN CBG26694
Paelopatides23501ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides23502SRCR DOMAIN-CONTAINING PROTEIN
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