About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides23839INHIBITOR OF APOPTOSIS
Paelopatides23840PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides23841PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides23842-
Paelopatides23844MALE FERTILITY FACTOR KL5
Paelopatides23845-
Paelopatides23846-
Paelopatides23847-
Paelopatides23848FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides23849PROTEIN DISULFIDE ISOMERASE
Paelopatides23850ARFAPTIN-RELATED
Paelopatides23851-
Paelopatides23852REVERSE TRANSCRIPTASES
Paelopatides23853-
Paelopatides23854CENTROSOMAL PROTEIN OF 290 KDA
Paelopatides23855CENTROSOMAL PROTEIN OF 290 KDA
Paelopatides23856VESICLE PROTEIN SORTING-ASSOCIATED
Paelopatides23860-
Paelopatides23861PROTEIN PHOSPHATASE INHIBITOR
Paelopatides23863CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 46
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