About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides23819EPM2A-INTERACTING PROTEIN 1
Paelopatides23820-
Paelopatides23821GLYCOSYLTRANSFERASE-LIKE 1
Paelopatides23822GLYCOSYLTRANSFERASE-LIKE 1
Paelopatides23823C-TYPE LECTIN SUPERFAMILY MEMBER
Paelopatides23824PROTEIN CBG26694
Paelopatides23825-
Paelopatides23826ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides23827POL PROTEIN
Paelopatides23828-
Paelopatides23829DED DOMAIN-CONTAINING PROTEIN
Paelopatides23830-
Paelopatides23831POL PROTEIN
Paelopatides23832ELONGATION FACTOR TU-RELATED
Paelopatides23833REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides23834-
Paelopatides23835REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides23836CYTOCHROME P450 FAMILY 46 SUBFAMILY A
Paelopatides23837-
Paelopatides23838REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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