About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides24115-
Paelopatides24116-
Paelopatides24117PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides24118PROTEIN CBG26694
Paelopatides24119ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides24122LD09343P
Paelopatides24123-
Paelopatides24124INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides24125KELCH PROTEIN
Paelopatides24126-
Paelopatides24127SULFOTRANSFERASE SULT
Paelopatides24128PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides24129HISTIDINE-RICH GLYCOPROTEIN
Paelopatides24130REVERSE TRANSCRIPTASES
Paelopatides24131REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides24132-
Paelopatides24135UNCHARACTERIZED
Paelopatides24136-
Paelopatides24137ACTIVATOR OF S-PHASE KINASE-RELATED
Paelopatides24138RING FINGER PROTEIN 141-RELATED
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