About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides24183FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides24184-
Paelopatides24185-
Paelopatides24186SERINE/THREONINE-PROTEIN KINASE TAO1-LIKE PROTEIN
Paelopatides24187NETRIN RECEPTOR UNC5
Paelopatides241883-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE
Paelopatides24189-
Paelopatides241902-5 OLIGOADENYLATE SYNTHETASE
Paelopatides24191TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides24192ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides24193UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Paelopatides24194-
Paelopatides24195-
Paelopatides24196PROTEIN CBG26694
Paelopatides24197-
Paelopatides2419852 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides24199PROTEIN CBG26694
Paelopatides24200UNCHARACTERIZED
Paelopatides24201BUCENTAUR RELATED
Paelopatides24202NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
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