About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides24160HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides24161FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides24162-
Paelopatides24163-
Paelopatides24164ZGC:101858
Paelopatides24165PEPTIDASE
Paelopatides24166REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides24167-
Paelopatides24168HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN
Paelopatides24169-
Paelopatides24170SOLUBLE NSF ATTACHMENT PROTEIN SNAP
Paelopatides24171REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides24172DYNEIN LIGHT INTERMEDIATE CHAIN
Paelopatides24173RAS-RELATED PROTEIN RAB
Paelopatides24174-
Paelopatides24175-
Paelopatides24176-
Paelopatides24177TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides24181REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides24182REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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