About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides24675ENDONUCLEASE-RELATED
Paelopatides24676ENDONUCLEASE-RELATED
Paelopatides24677ENZYMATIC POLYPROTEIN-RELATED
Paelopatides24678-
Paelopatides24679CXXC-TYPE ZINC FINGER PROTEIN 1
Paelopatides24680CXXC-TYPE ZINC FINGER PROTEIN 1
Paelopatides24681-
Paelopatides24682CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides24683GAG-RELATED PROTEIN
Paelopatides24684BUCENTAUR RELATED
Paelopatides24685PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides24686GLUTAMATE 5-KINASE
Paelopatides24687ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides24688-
Paelopatides24689-
Paelopatides24690POL PROTEIN
Paelopatides24691ENDONUCLEASE-RELATED
Paelopatides24692EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA
Paelopatides24695TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54
Paelopatides24696TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54
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