The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides60746 | DNA REPLICATION FACTOR CDT1 |
Paelopatides60747 | HYR DOMAIN-CONTAINING PROTEIN |
Paelopatides60748 | DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4 |
Paelopatides60749 | HYR DOMAIN-CONTAINING PROTEIN |
Paelopatides60750 | FI04643P-RELATED |
Paelopatides60751 | ENOYL-COA HYDRATASE-RELATED |
Paelopatides60752 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Paelopatides60753 | PLACENTAL PROTEIN 11-RELATED |
Paelopatides60754 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60755 | |
Paelopatides60757 | |
Paelopatides60758 | |
Paelopatides60759 | MARGINAL ZONE B- AND B1-CELL-SPECIFIC PROTEIN |
Paelopatides60760 | |
Paelopatides60761 | UNCHARACTERIZED |
Paelopatides60762 | GALACTOSE-3-O-SULFOTRANSFERASE |
Paelopatides60763 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60764 | CELL DIVISION PROTEIN KINASE |
Paelopatides60765 | |
Paelopatides60766 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60767 | 3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE 1 |
Paelopatides60768 | GROWTH FACTOR RECEPTOR-BOUND PROTEIN |
Paelopatides60769 | |
Paelopatides60770 | |
Paelopatides60771 | MYOSIN LIGHT CHAIN 1, 3 |
Paelopatides60772 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60773 | ORGANIC ANION TRANSPORTER |
Paelopatides60774 | TRANSPOSABLE ELEMENT-RELATED |
Paelopatides60775 | POL PROTEIN |
Paelopatides60776 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
Paelopatides60777 | ACYL-COA DEHYDROGENASE |
Paelopatides60778 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60779 | DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT |
Paelopatides60780 | DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT |
Paelopatides60781 | |
Paelopatides60782 | GTPASE, IMAP FAMILY MEMBER-RELATED |
Paelopatides60783 | |
Paelopatides60784 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60785 | METABOTROPIC GLUTAMATE RECEPTOR |
Paelopatides60786 | |
Paelopatides60787 | METABOTROPIC GLUTAMATE RECEPTOR |
Paelopatides60788 | METABOTROPIC GLUTAMATE RECEPTOR |
Paelopatides60789 | CENTROSOMAL PROTEIN OF 162 KDA |
Paelopatides60790 | REVERSE TRANSCRIPTASE |
Paelopatides60791 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides60792 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides60793 | ENDONUCLEASE-RELATED |
Paelopatides60794 | PROTEIN CBG26694 |
Paelopatides60795 | |
Paelopatides60796 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |