The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides60950 | |
Paelopatides60951 | PROTEIN CBG26694 |
Paelopatides60952 | |
Paelopatides60953 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Paelopatides60954 | |
Paelopatides60955 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60956 | DNA REPAIR PROTEIN XRCC2 |
Paelopatides60957 | DNA REPAIR PROTEIN XRCC2 |
Paelopatides60958 | THYROID HORMONE RECEPTOR-ASSOCIATED PROTEIN-RELATED |
Paelopatides60959 | THYROID HORMONE RECEPTOR-ASSOCIATED PROTEIN-RELATED |
Paelopatides60960 | |
Paelopatides60961 | DNA-DIRECTED RNA POLYMERASE II, III |
Paelopatides60962 | INNER MEMBRANE PROTEIN YCCF |
Paelopatides60963 | VACUOLAR CALCIUM ION TRANSPORTER |
Paelopatides60964 | VACUOLAR CALCIUM ION TRANSPORTER |
Paelopatides60965 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60966 | STEERIN |
Paelopatides60967 | PROTEIN CBG26694 |
Paelopatides60968 | PROTEIN CBG26694 |
Paelopatides60969 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60971 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides60972 | ENOYL-COA HYDRATASE-RELATED |
Paelopatides60973 | NEUROTRANSMITTER GATED ION CHANNEL |
Paelopatides60974 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4 |
Paelopatides60976 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60977 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
Paelopatides60978 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides60979 | |
Paelopatides60980 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
Paelopatides60981 | - |
Paelopatides60982 | TETRATRICOPEPTIDE REPEAT PROTEIN 39 FAMILY MEMBER |
Paelopatides60983 | TYROSINE-PROTEIN KINASE RECEPTOR |
Paelopatides60984 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
Paelopatides60985 | TUBULIN EPSILON AND DELTA COMPLEX PROTEIN 2 |
Paelopatides60986 | RABPHILIN, ISOFORM A |
Paelopatides60987 | |
Paelopatides60988 | SERINE/THREONINE-PROTEIN KINASE LMTK1 |
Paelopatides60989 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60990 | PROTEIN CBG26694 |
Paelopatides60991 | |
Paelopatides60992 | |
Paelopatides60993 | RETROTRANSPOSON |
Paelopatides60994 | |
Paelopatides60995 | |
Paelopatides60996 | |
Paelopatides60997 | SI:CH211-108C17.2-RELATED-RELATED |
Paelopatides60998 | NEUROTRANSMITTER GATED ION CHANNEL |
Paelopatides60999 | |
Paelopatides61000 | ZGC:195170 |
Paelopatides61002 | BUCENTAUR RELATED |