About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides24655NETRIN RECEPTOR UNC5
Paelopatides24656-
Paelopatides24657L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides24658-
Paelopatides24659TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides24660-
Paelopatides24661-
Paelopatides24662-
Paelopatides24663HISTONE H2B
Paelopatides24664HISTONE H2A
Paelopatides24665HISTONE H3
Paelopatides24666HISTONE H4
Paelopatides24667HISTONE H2B
Paelopatides24668HISTONE H2A
Paelopatides24669-
Paelopatides24670PROTEIN CBG26694
Paelopatides24671REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides24672-
Paelopatides24673PARANEOPLASTIC ANTIGEN
Paelopatides24674POL PROTEIN
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