About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides25255-
Paelopatides25256PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides25258MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides25259LATROPHILIN RECEPTOR-LIKE PROTEIN A
Paelopatides25260PUTATIVE-RELATED
Paelopatides25261GUANYLATE BINDING PROTEIN
Paelopatides25262SLR5058 PROTEIN
Paelopatides25263REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides25264-
Paelopatides25265EXPRESSED PROTEIN
Paelopatides25266CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides25267INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides25268SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides25269-
Paelopatides25270REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides25271ENDONUCLEASE
Paelopatides25273DISCS LARGE
Paelopatides25274REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides25275ZGC:174356
Paelopatides25276-
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