About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides25235EPM2A-INTERACTING PROTEIN 1
Paelopatides25236-
Paelopatides25237-
Paelopatides25238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides25239LEUCOKININ RECEPTOR-RELATED
Paelopatides25240TRANSPOSON
Paelopatides25241EXPRESSED PROTEIN
Paelopatides25242-
Paelopatides25243ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides25244CYSTEINE DESULFURASE
Paelopatides25245ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides25246ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides25247REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides25248SULFURTRANSFERASE-RELATED
Paelopatides25249-
Paelopatides25250PROTEIN CBG26694
Paelopatides25251-
Paelopatides25252FI04487P
Paelopatides25253-
Paelopatides25254-
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