About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides25277-
Paelopatides25278RRM DOMAIN-CONTAINING PROTEIN
Paelopatides25279PROLINE-RICH EXTENSIN-LIKE PROTEIN EPR1
Paelopatides25282REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides25283ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides25284NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides25285-
Paelopatides25286INSULIN GENE ENHANCER PROTEIN
Paelopatides25287GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides25288-
Paelopatides25289ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides25290RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED
Paelopatides25291IQ DOMAIN-CONTAINING PROTEIN K
Paelopatides25292ARMADILLO-LIKE HELICAL DOMAIN-CONTAINING PROTEIN 2
Paelopatides25293-
Paelopatides25294-
Paelopatides25295-
Paelopatides25296CHAPERONIN
Paelopatides25297-
Paelopatides25298PROTEIN CBG26694
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