About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides25783NEUROCHONDRIN
Paelopatides25784NUCLEAR MOVEMENT PROTEIN NUDC
Paelopatides25785GEM-ASSOCIATED PROTEIN 5
Paelopatides25786COMM DOMAIN-CONTAINING PROTEIN 4-8 FAMILY MEMBER
Paelopatides25787NEUROTRANSMITTER GATED ION CHANNEL
Paelopatides25788-
Paelopatides25789CEREBELLIN-RELATED
Paelopatides25790CEREBELLIN-RELATED
Paelopatides25791-
Paelopatides25792-
Paelopatides25793-
Paelopatides25794HOMEOBOX PROTEIN NKX
Paelopatides25795-
Paelopatides25797MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides25798-
Paelopatides25799-
Paelopatides25800-
Paelopatides25801PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides25802-
Paelopatides25803-
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