About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides25666HISTONE H2A
Paelopatides25667-
Paelopatides25668-
Paelopatides25669PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides25670PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides25672UNCHARACTERIZED
Paelopatides25673CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED
Paelopatides25674EF-HAND DOMAIN C-TERMINAL CONTAINING PROTEIN
Paelopatides25675DED DOMAIN-CONTAINING PROTEIN
Paelopatides25676INTEGRIN BETA SUBUNIT
Paelopatides25677INTEGRIN BETA SUBUNIT
Paelopatides25678-
Paelopatides25679PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides25680NYD-SP28 PROTEIN
Paelopatides25681WD-40 REPEAT PROTEIN
Paelopatides25682TYROSINE-PROTEIN KINASE
Paelopatides25684PROTEIN CBG26694
Paelopatides25685SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides25686SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides25687-
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