About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides26282-
Paelopatides26283PROTEIN CBG26694
Paelopatides26286MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 22
Paelopatides26287XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED
Paelopatides26288PEFLIN
Paelopatides26289G-PROTEIN COUPLED RECEPTOR
Paelopatides26290ZINC FINGER PROTEIN
Paelopatides26291PHD FINGER PROTEINS
Paelopatides26292PHD FINGER PROTEINS
Paelopatides26293EPM2A-INTERACTING PROTEIN 1
Paelopatides26294B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides26295ENDONUCLEASE-RELATED
Paelopatides26296POL PROTEIN
Paelopatides26297B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides26298-
Paelopatides26299FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides26300-
Paelopatides26301-
Paelopatides26302-
Paelopatides26303-
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