About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides26659LIM DOMAIN ONLY 7
Paelopatides26660-
Paelopatides26661CLARIN
Paelopatides26662-
Paelopatides26663PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides26664-
Paelopatides26665-
Paelopatides26666-
Paelopatides26667-
Paelopatides26669SERINE/THREONINE-PROTEIN KINASE 17
Paelopatides26670TRANSPOSON
Paelopatides26675ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides26676-
Paelopatides26678PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE
Paelopatides26679BONUS, ISOFORM C-RELATED
Paelopatides26680REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides26681MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B
Paelopatides26684G-PROTEIN COUPLED RECEPTOR 158-RELATED
Paelopatides26685-
Paelopatides26686CXC DOMAIN-CONTAINING PROTEIN-RELATED
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