About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides26708ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides26709-
Paelopatides26710UNCHARACTERIZED
Paelopatides26711-
Paelopatides26712OS01G0253100 PROTEIN
Paelopatides26713DNA HELICASE RECQ FAMILY MEMBER
Paelopatides26714-
Paelopatides26715CXC2 DOMAIN-CONTAINING PROTEIN
Paelopatides26716-
Paelopatides26717PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides26718-
Paelopatides26719-
Paelopatides26720FI04035P
Paelopatides26721HIKESHI FAMILY MEMBER
Paelopatides26722ENZYMATIC POLYPROTEIN-RELATED
Paelopatides26723PROTEIN CBG26694
Paelopatides26724-
Paelopatides26725ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides26726PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides26727ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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