About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides26687TRANSPOSON
Paelopatides26688CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides26689-
Paelopatides26690EPM2A-INTERACTING PROTEIN 1
Paelopatides26691EPM2A-INTERACTING PROTEIN 1
Paelopatides26692ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides26693FORMIMINOTRANSFERASE-CYCLODEAMINASE
Paelopatides26694UNCHARACTERIZED
Paelopatides26695-
Paelopatides26696UNCHARACTERIZED PROTEIN C17ORF53 HOMOLOG
Paelopatides26697FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides26698B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides26699ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides26700CCHC-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides26701-
Paelopatides26702SI:CH211-108C17.2-RELATED-RELATED
Paelopatides26703BUCENTAUR RELATED
Paelopatides26704REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides26705PROTEIN CBG26694
Paelopatides26706-
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