About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides27002-
Paelopatides27004RAB11-BINDING PROTEIN RELCH
Paelopatides27005RAB11-BINDING PROTEIN RELCH
Paelopatides27006-
Paelopatides27007-
Paelopatides27008SI:CH211-196P9.1-RELATED
Paelopatides27009EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
Paelopatides27010UNCHARACTERIZED
Paelopatides27012STATHMIN
Paelopatides27013CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides27014ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides27015ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides27016-
Paelopatides27017VALYL-TRNA SYNTHETASES
Paelopatides27018VALYL-TRNA SYNTHETASES
Paelopatides27020NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides27021ENDONUCLEASE-RELATED
Paelopatides27022-
Paelopatides27023POL PROTEIN
Paelopatides27024ATAXIA TELANGIECTASIA MUTATED ATM -RELATED
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