About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides27025ATAXIA TELANGIECTASIA MUTATED ATM -RELATED
Paelopatides27026RIBONUCLEASE P SUBUNIT P21
Paelopatides27027CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 4-RELATED
Paelopatides27028-
Paelopatides27029-
Paelopatides27030-
Paelopatides27031-
Paelopatides27032ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides27034PROTEIN CBG26694
Paelopatides27035CARNITINE O-ACYLTRANSFERASE
Paelopatides27036CARNITINE O-ACYLTRANSFERASE
Paelopatides27037RHO GDP-DISSOCIATION INHIBITOR
Paelopatides27038-
Paelopatides27039SPRY DOMAIN CONTAINING SOCS BOX PROTEIN
Paelopatides27040EME1 PROTEIN
Paelopatides27041LEUCOKININ RECEPTOR-RELATED
Paelopatides27042LEUCOKININ RECEPTOR-RELATED
Paelopatides27043CELL ADHESION MOLECULE
Paelopatides27044UNCHARACTERIZED
Paelopatides27045-
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