About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides27928-
Paelopatides27929-
Paelopatides27930UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Paelopatides27931-
Paelopatides27932BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
Paelopatides27933THAP DOMAIN PROTEIN
Paelopatides27934ATP-DEPENDENT DNA HELICASE
Paelopatides27935-
Paelopatides27936PROTEIN CBG26694
Paelopatides27937-
Paelopatides27938UNCHARACTERIZED
Paelopatides27939-
Paelopatides27940CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR
Paelopatides27941-
Paelopatides27942DUF853 DOMAIN-CONTAINING PROTEIN
Paelopatides27943-
Paelopatides27944-
Paelopatides27945-
Paelopatides27946-
Paelopatides27947ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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