About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides27865PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides27866PROTEIN SIDEKICK
Paelopatides27867PROTEIN SIDEKICK
Paelopatides27868-
Paelopatides27869REVERSE TRANSCRIPTASES
Paelopatides27870ATP-DEPENDENT DNA HELICASE
Paelopatides27871THAP DOMAIN PROTEIN
Paelopatides27872PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Paelopatides27873-
Paelopatides27874PROTEIN CBG26694
Paelopatides2787652 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides27877REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides27878ZGC:195170
Paelopatides27880ENDONUCLEASE-RELATED
Paelopatides27881ENDONUCLEASE-RELATED
Paelopatides27882-
Paelopatides27883TARGET OF RAPAMYCIN COMPLEX 2 SUBUNIT BIT61-RELATED
Paelopatides27884MITOCHONDRIAL CARRIER HOMOLOG
Paelopatides27885REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides27886ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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