About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides27948-
Paelopatides27949REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides27951ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides27952CORNICHON-RELATED
Paelopatides27953-
Paelopatides27954GLIAL FACTOR NATURATION FACTOR
Paelopatides27955PROTEIN CBG26694
Paelopatides27956RNA METHYLTRANSFERASE
Paelopatides27957-
Paelopatides27958LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Paelopatides27959-
Paelopatides27960ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides27961ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides27962FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides27963REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides27964REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides27965REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides27966L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides27967-
Paelopatides27968-
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