About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides27908-
Paelopatides2790952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides27910RAN BINDING PROTEIN
Paelopatides27911-
Paelopatides27912-
Paelopatides27913PA14 DOMAIN-CONTAINING PROTEIN
Paelopatides27914EGF-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides27915-
Paelopatides27916UPF0669 PROTEIN C6ORF120
Paelopatides27917PEROXISOME BIOGENESIS FACTOR 2
Paelopatides27918PROTEIN CBG26694
Paelopatides27919ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides27920PROTEIN CBG26694
Paelopatides27921HEPARAN SULFATE SULFOTRANSFERASE
Paelopatides27922FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides27923RETROTRANSPOSON
Paelopatides27924RETROTRANSPOSON
Paelopatides27925AGAP005329-PA
Paelopatides27926-
Paelopatides27927INTEGRASE CORE DOMAIN CONTAINING PROTEIN
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