About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides28011GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides28012SI:CH211-196P9.1-RELATED
Paelopatides28013CARBOHYDRATE SULFOTRANSFERASE
Paelopatides28014-
Paelopatides28015L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides28016REVERSE TRANSCRIPTASES
Paelopatides28017LITHOSTATHINE
Paelopatides28018ORGANIC ANION TRANSPORTER
Paelopatides28019-
Paelopatides28020ORGANIC ANION TRANSPORTER
Paelopatides28021N-LYSINE METHYLTRANSFERASE KMT5A
Paelopatides28022-
Paelopatides28023-
Paelopatides28024E3 SUMO-PROTEIN LIGASE CBX4
Paelopatides28025PROTEIN CBG26694
Paelopatides28026PROTEIN CBG26694
Paelopatides28027FI04643P-RELATED
Paelopatides28028REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides28029ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides28030HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
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