About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides28092-
Paelopatides28093LUPUS LA PROTEIN-RELATED
Paelopatides28094-
Paelopatides28095B-LYMPHOCYTE ANTIGEN-RELATED
Paelopatides28096CRAMPED PROTEIN
Paelopatides28097-
Paelopatides28098SARCOGLYCAN
Paelopatides28099CENTROSOMAL PROTEIN 2
Paelopatides28100NETRIN RECEPTOR UNC5
Paelopatides28101-
Paelopatides28102-
Paelopatides28103GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides281045'-NUCLEOTIDASE-RELATED
Paelopatides28105VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Paelopatides28106VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Paelopatides28107SULFOTRANSFERASE SULT
Paelopatides28108EXPRESSED PROTEIN
Paelopatides28109-
Paelopatides28110UBIQUITIN-PROTEIN LIGASE E3C
Paelopatides28111-
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