About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides28155REVERSE TRANSCRIPTASES
Paelopatides28156-
Paelopatides28157CYTOCHROME P450 508A4-RELATED
Paelopatides28158REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides28159ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides28160PROTEIN CBG26694
Paelopatides28161MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3
Paelopatides28162T CELL-SPECIFIC ADAPTER PROTEIN TSAD
Paelopatides28163-
Paelopatides28164-
Paelopatides28165-
Paelopatides28166-
Paelopatides28167-
Paelopatides28168FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides28169FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides28170REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides28171-
Paelopatides28172-
Paelopatides28173-
Paelopatides28174TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II
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