About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides28195PROTEIN DIAPHANOUS
Paelopatides28196PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN
Paelopatides28197RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides28198-
Paelopatides28199-
Paelopatides28200ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE
Paelopatides28201-
Paelopatides28202RETROTRANSPOSON
Paelopatides28203RETROTRANSPOSON
Paelopatides28204NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides28205ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2
Paelopatides28206REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides28207SKELETOR-RELATED
Paelopatides28208-
Paelopatides28209-
Paelopatides28210REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides28211-
Paelopatides28212-
Paelopatides28213MADF DOMAIN TRANSCRIPTION FACTOR
Paelopatides28214-
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